PROTEOMICS podcast

Proteomics Reveals Acute Pro-inflammatory and Protective Responses in Rat Kupffer Cells and Hepatocytes after Chemical Initiation of Liver Cancer and after LPS and IL-6, Proteomic analysis of cells in the early stages of Herpes Simplex Virus Type-1 infection reveals widespread changes in the host cell proteome, Proteomic changes in the hypothalamus and retroperitoneal fat from male F344 rats subjected to repeated light-dark shifts

Activity-based mass spectrometric characterization of proteases and inhibitors in human saliva, Large-scale proteomic analysis of tyrosine-phosphorylation induced by T-cell receptor or B-cell receptor activation reveals new signaling pathways, Calpain-truncated CRMP-3 and -4 contribute to potassium deprivation-induced apoptosis of cerebellar granule neurons

Celebrating the 65th Birthday of Professor Angelika Goerg: Editorial comment, Tribute interview, Special interview; IPGs for IEF of peptides, 2D-DIGE reveals novel proteins of liver carcinogenesis, Analysis of serum for biomarkers of renal cancer

Quantitative protein microarrays for time-resolved measurements of protein phosphorylation, Network analysis of TGF-beta proteomics, Membrane rafts of melanoma cells identifies protein patterns characteristic of tumor progression, Viewpoint interview: Science, marketing and wishful thinking in quantitative proteomics

Advances in Membrane Proteomics, Self-assembling protein microarrays, The PROTEOMICS podcast is 2 years old this month, Quantifying cytochrome P450 protein concentrations using mass spectrometry

Imaging Mass Spectrometry, Evaluation of microarray surfaces and arraying parameters for autoantibody profiling, Report, Laser ablation ICP mass spectrometry for imaging of cancer biomarkers

Toward cancer biomarker discovery using the Glycomics Approach, Quantitative membrane proteomics of small cell lung cancer resistance mechanisms, Identification of protein interactome in pancreatic cancer: A Yeast Two-Hybrid Approach, A peptide-based 2D LC platform for quantitative analysis of the disease proteome

Special Issue "Renal and urinary proteomics", Proteomic Strategies in Bladder Cancer: From Tissue to Fluid and Back, Renal cyst fluid proteome, Proteomics in Trypanosoma cruzi, Reports, Proteomic analysis in assisted reproductive technologies

Special Issue "Cardiovascular proteomics", An FT MS-based workflow for label-free dMS analysis of human plasma, Reports, A cross-species proteomic study of salt adaptation in a halotolerant environmental isolate using metabolic labelling, Discrimination between stable and dynamic components of protein complexes

Special Issue "Animal models in human disease", Molecular chaperone function in sickle red cells, Reports, PTMs during differentiation in Leishmania, A protein kinase C alpha-specific substrate, Viewpoint Interview: Deja vu in proteomics. A hit parade of repeatedly identified differentially expressed proteins

Discovery and validation of urinary biomarkers for prostate cancer, Reports appearing in PROTEOMICS issue 7, COmbined FRActional DIagonal Chromatography (COFRADIC), Possible action of induced proteins on Alzheimer's disease

Targets of natural anti-endothelial cell antibodies, PROTEOMICS Clinical Applications - Reviews Part II, Reports, Special Issue on the Human Brain Proteome Project, Proteasome subunit proteins and neuropathology in tauopathies and synucleinopathies

A partial Mycobacterium avium subspecies paratuberculosis protein array, Proteomics of osteoarthritic chondrocytes, Appearing in other issues - Reviews, Are protein complexes made of cores, modules and attachments?

Editorial interview, Identifying novel markers of stable and unstable angina, Altered phosphorylation in a tropomyosin mutant linked to dilated cardiomyopathy, Introducing Reports, Fate of pyruvate kinase and adenylate kinase in aged rat skeletal muscle.

Multiple reaction monitoring assays for liver derived plasma proteins, Environmental proteomics in wild mice, Announcing: Meeting Report - Grand Rounds in Proteomics at the FDA, Novel cleavage of reticulon protein Nogo-B by caspase-7.

Biomarkers for detection of early stages of Alzheimer's disease, News from the Editorial Office, Differentially expressed serum proteins following skin irradiation in mice, Announcing: PROTEOMICS - Clinical Applications Neuroproteomics Special Issue and Practical Proteomics latest issue, Glycosylation profiling of IgG subclasses from human serum.

The PROTEOMICS podcast is 1 year old, Analysis pipeline for uniform N-15 labeling, Dihydroxyacetone-induced formation of AGE in yeast and worm, Abnormal pathways in the genu of the corpus callosum in schizophrenia pathogenesis.

Extracellular proteins in vitro and in planta from pathogenic Fusarium graminearum, Tear proteomics after a corneal wound, Proteomics Data Collection - 1st ProDaC Workshop in Lyon, The mucin type O-glycoproteome of Drosophila melanogaster S2 cells, Antibody screening database for protein kinetic modeling.

Annual reviews issue, Computational Analysis of Human Protein Interaction Networks, Proteome-wide changes induced by the HSP90 inhibitor, geldanamycin in anaplastic large cell lymphoma cells, Novel eye-specific calmodulin methylation characterized by protein mapping in Drosophila melanogaster.

"goProteomics" website, Biofluids special issue, Annual reviews issue, Peptidomic analysis using capillary electrophoresis coupled to mass spectrometry, Quantification of heart fatty acid binding protein as a biomarker for drug-induced cardiac and musculoskeletal necroses, Pre-analytical influence on the low molecular weight cerebrospinal fluid proteome.

"goProteomics" website, Proteome and cytoskeleton responses in osteosarcoma cells with reduced OXPHOS activity, Analysis of phosphoproteins using SELDI TOF MS, Isolation of signal transduction complexes using biotin and crosslinking methodologies.

Expression of aquaportin-1 in renal cell carcinoma, Hemoglobin depletion from erythrocyte cytosol for 2D gel proteomics, Serum peptide profiling using novel magnetic C18 beads offline coupled to MALDI-TOF MS, "goProteomics" website.

S100A8 in pancreatic cancer-associated monocytes is associated with the Smad4 status of pancreatic cancer cells, Outer membrane proteome of Actinobacillus pleuropneumoniae: LC-MS/MS analyses validate in silico predictions, Report: Second International Workshop "2D-DIGE Applications in Proteomics", Protein prenylation in an insect cell-free protein synthesis system, Proteome analysis of proliferative response of bystander cells adjacent to cells exposed to ionizing radiation, "goProteomics" website.

Placental proteomes in preeclampsia, Report: The 2006 Human Liver Proteome Project (HLPP) Workshops, Microarray for autoantibody profiling of prostate cancer sera, "goProteomics" website.

Proteome and phosphoproteome change during cell dedifferentiation in Arabidopsis, Transcriptome and proteome analyses of the catabolism of aromatic compounds in Bacillus subtilis, Report: Frontiers in Glycomics - Bioinformatics and Biomarkers in Disease, Report: From Genome to Proteome - Back to the Future, Analysis of exported proteins from Mycobacterium tuberculosis H37Rv, Proteome-wide analysis of the serological response to vaccinia and smallpox, "goProteomics" website.

Anticancer effects of aloe-emodin on HepG2 cells, Murine plasma protein response to sepsis, Biomarkers for type 2 diabetic nephropathy.

Detection of transient protein-protein interactions by bimolecular fluorescence complementation, Identification of carbonylated proteins using affinity chromatography-stable isotope labeling and MS/MS, Relative Expression Reversals applied to 2-D DIGE data, 2-DE analysis of EM-G3 cells derived from breast cancer progenitor cells.

Editorial interview - Systems Biology, A spectral library searching method for peptide identification, Cysteine synthase as a key player in the aluminium response in rice, Reconstructing biochemical pathways from time course data, Discovery of novel nucleolar proteins based on automatic analysis of MEDLINE.

Biomarkers of cisplatin resistance in ovarian cancer, T-cells over-expressing telomerase, Proteomic expression profiling of thyroid neoplasms.

Clinical Proteomics: a need to define the field and to begin to set adequate standards - An interview with three experts in clinical proteomics who explain what needs to be done in order to improve and maintain the integrity of the science of clinical proteomics.

AFM fishing nanotechnology is the way to reverse the Avogadro number in proteomics - An extended interview with Alexander Archakov explaining his viewpoint regarding the route to mining the low abundance and low molecular weight regions of proteomes of interest.

Targeting the low molecular weight proteome, Whole cell profiling for markers of renal cell carcinoma, Plasma membrane proteomics

Extracellular proteome of Aeromonas hydrophila AH-1, Albumin and Hsp70 in corneal epithelial wound repair, Arginine-mediated protein expression in intestinal Caco-2 cells, 3D-LC-MS/MS proteomics

The launch of PROTEOMICS - Clinical Applications, Albumin proteomics, Analysis of post-translational modifications of histones, Autoantigens in rheumatoid arthritis

The 'family' of PROTEOMICS journals, A liquid-phase IEF for Leishmania proteins, Proteomics of prostate cancer cells, Photo-generated glycan arrays and anthrax spores, Protein phosphatase 2A binding proteins

The Launch of PRACTICAL PROTEOMICS, The new Glycoproteomics Section, Protein Clusters in Esophageal Cancer, Mass Spectrometric Genomic Data Mining, CyDye Immunoblotting for Proteomics, Proteomic Analysis of Stem Cell-Derived Smooth Muscle Cells, and Obituary

Editorial Interview with Mike Dunn, TLC & Phosphoproteomics, PLCβ1 & Nuclear proteomics, Heart failure & Mass spectral patterns, and Secretome proteomics.

Introduction to Featured Papers, Prion Protein Binding Partners, Yeast PIN, and MHC Peptides & Cancer.

Mike Dunn's Editorial, HUPO Plasma Proteome Project, HUPO, and a Viewpoint article.