207-SpaceSequest:统一空间转录组数据分析流 episode artwork

EPISODE · Nov 4, 2025 · 21 MIN

207-SpaceSequest:统一空间转录组数据分析流

from 聊聊Sci

这篇文章介绍了 SpaceSequest,这是一个统一的计算管道,旨在简化和标准化来自各种平台的空间转录组学 数据分析、可视化和发布,这些平台包括10x Genomics的 Visium、Visium HD、Xenium,以及NanoString的 GeoMx和CosMx。该管道通过解决不同平台数据格式多样化带来的挑战,实现了从数据质量控制到关键分析(如 空间聚类、细胞类型解卷积和差异表达分析)的端到端处理。SpaceSequest 利用了先进的计算工具,并与 Cellxgene VIP 和 Quickomics 等可视化工具集成,使用户能够深入了解复杂的生物系统和其微环境。References: Sun, Yu H., et al. "SpaceSequest: A unified pipeline for spatial transcriptomics data analysis." bioRxiv (2025): 2025-09.前往小宇宙评论区与主播互动

Episode metadata supplied by the publisher feed · Published Nov 4, 2025

Embed this episode

Ready to play

207-SpaceSequest:统一空间转录组数据分析流

0:00 21:40

No transcript for this episode yet

We transcribe on demand. Request one and we'll notify you when it's ready — usually under 10 minutes.

No similar episodes found.

Frequently Asked Questions

How long is this episode of 聊聊Sci?

This episode is 21 minutes long.

When was this 聊聊Sci episode published?

This episode was published on November 4, 2025.

Can I download this 聊聊Sci episode?

Yes. Use the download control on the episode player to save the publisher-provided media file.
URL copied to clipboard!