PODCAST · science
BioCyc Webinars
by SRI International
BioCyc Webinars: The BioCyc Webinar series introduces users to the basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Tour one of our many model organism databases or make your own, all with BioCyc and Pathway Tools.
Episodes
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Structured Advanced Query Page Quick Introduction
Get a jumpstart on using the SAQP with this brief intro.
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The Structured Advanced Query Page
Expand your use of BioCyc by learning how to run queries across one or several databases with the Structured Advanced Query Page.
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Introduction to BioCyc, Part 8
Round out your introductory tour with a visit to BioCyc's representation of compounds.
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Introduction to BioCyc, Part 7
Find out how BioCyc handles metabolic reactions.
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Introduction to BioCyc, Part 6
Find out how BioCyc represents proteins.
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Introduction to BioCyc, Part 5
Learn how to use BioCyc to understand metabolic and signaling pathways.
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Introduction to BioCyc, Part 4
Learn about how BioCyc represents genes, operons, and gene regulation.
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Introduction to BioCyc, Part 3
Learn about the BioCyc tools that will let you take a high-level view of your favorite organism's biology.
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Introduction to BioCyc, Part 2
Learn how to find what you need using the quick, intermediate, and advanced search tools of BioCyc.
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Introduction to BioCyc, Part 1
Start learning about the BioCyc site, its contents, and how to use them.
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BioCyc 2009 Update
We've completely revised the BioCyc web site. This webinar will introduce experienced users to key features of the new site, giving you a jump start on getting even more out of BioCyc than before.
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Making a Model Organism Database - Part 2D
This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Now that we've covered reactions and proteins, part two continues with a look at making and editing metabolic pathways.
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Making a Model Organism Database - Part 2C
This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. In this section of part two, we cover making and editing proteins and protein complexes, as well as assigning GO terms, including literature citations in your database, and…
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Making a Model Organism Database - Part 2B
This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part two continues with a detailed look at creating and editing chemical reactions and compounds.
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Making a Model Organism Database - Part 2A
This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part two begins by discussing the general strategy involved in editing your database, from choosing an emphasis through finding information.
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Making a Model Organism Database - Part 1
This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part one takes you from a Genbank file for your organism of interest through draft database construction, pathway and other predictions, and the pathway hole-filling process.
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Comparative and Omics Tools in BioCyc - Part 4
This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer.
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Comparative and Omics Tools in BioCyc - Part 3
This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer.
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Comparative and Omics Tools in BioCyc - Part 2
This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer.
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Comparative and Omics Tools in BioCyc - Part 1
This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer.
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Introduction to BioCyc - Part 5
This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 5 of 5, we round out our introductory tour with a discussion of proteins, protein complexes, and metabolic reactions.
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Introduction to BioCyc - Part 4
This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 4 of 5, we move over to genes, looking at how we capture information on genes, operons, transcriptional regulation, and the whole genome, including an overview…
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Introduction to BioCyc - Part 3
This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 3of 5, we look at how metabolic pathways are captured in a BioCyc database, including pathway summaries, pathway diagrams, and regulatory information.
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Introduction to BioCyc - Part 2
This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 2 of 5, we look at how compounds and transporters are represented in a BioCyc model organism database.
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Introduction to BioCyc - Part 1
This video series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 1 of 5, we look at the site's contents and how you can use searches, hierarchical browsing and other features to find exactly what you need in our extensive...
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ABOUT THIS SHOW
BioCyc Webinars: The BioCyc Webinar series introduces users to the basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Tour one of our many model organism databases or make your own, all with BioCyc and Pathway Tools.
HOSTED BY
SRI International
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Frequently Asked Questions
How many episodes does BioCyc Webinars have?
BioCyc Webinars currently has 25 episodes available on PodParley. New episodes are automatically indexed when they're published to the podcast feed.
What is BioCyc Webinars about?
BioCyc Webinars: The BioCyc Webinar series introduces users to the basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Tour one of our many model organism databases or make your own, all with BioCyc and...
How often does BioCyc Webinars release new episodes?
BioCyc Webinars has 25 episodes. Check the episode list to see recent publication dates and frequency.
Where can I listen to BioCyc Webinars?
You can listen to BioCyc Webinars on PodParley by clicking any episode. We provide an embedded audio player for direct listening, and you can also subscribe via your preferred podcast app using the RSS feed.
Who hosts BioCyc Webinars?
BioCyc Webinars is created and hosted by SRI International.
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