All episodes
58 - StaPH-B careers with Curtis Kapsak and Kevin Libuit
57 StaPH-B - Docker containers for Public Health bioinformatics Part 1
56 SARS-CoV-2 And Sequencing Spike With Sanger Sequencing part 2
55 SARS-CoV-2 And Sequencing Spike With Sanger Sequencing - Welcome To 1995
54 SARS-CoV-2 In Canada and addressing data sharing and privacy
53 SARS-CoV-2 surveillance in Canada with CANCOGEN
52 SARS-CoV-2 sequencing in Denmark with Mads Albertsen
51 SARSCOV2 Round-up 3 and updates from Denmark
50 Atypical invasive non-typhoidal Salmonella in The Gambia
49 SARS-CoV-2 Tools and resources update
48 SARS-CoV-2 More Variants of Concern and updates from Africa
47 SARS-CoV-2 Rapid roundup and questions answered
46 SARS-CoV-2 genomics resources
45 Software deep dive: Enterobase
44 How to sequence SARS-CoV-2 using the ARTIC protocol with Joshua Quick
43 Why use genomics in an epidemic? with Sam Sheppard
42 Overcoming barriers to SARS-CoV-2 data analysis
41 SARS-CoV-2 Phylogenomics questions answered
40 A crash course in SARS-CoV-2 bioinformatics
39 Explaining the naming of SARS-CoV-2 new variants
38 Ontologies - effective data sharing
37 Ontologies - the secret sauce of bioinformatics
36 Roary the pangenome pipeline
35 The Wandering Bioinformatician
34 Moving from wet to dry with Phil Ashton
33 The untrained monkey
32 Looking behind Majora's Mask and nation wide tracking of SARS-CoV-2 genomics
31 Large scale sequencing of SARS-CoV-2 genomes from one region
30 How we made the podcast on our 1st birthday
29 Mashtree software deep dive
28 BRIG the BLAST Ring Image Generator
27 SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments
26 SARS-CoV-2 contextual data specification for open genomic epidemiology
25 Sustainable bioinformatics software
24 Experimental projects lead to experimental software
23 CoronaHiT: large scale multiplexing of SARS-CoV-2 genomes on Nanopore
22 Assembly after party
21 Setting up coronavirus sequencing for real-time public health surveillance
20 Assembly read healing
19 Microbinfies assemble
18 Panel - Has Nanopore rendered onsite Illumina obsolete?
17 Bayesian magic in practice
16 The theory behind Bayesian Magic
15 Bioinformatics war stories
14 La resistance lives on: The AMR deep dive
13 Questions not to ask
12 Phylogenetics with the arborists part 2
11 Phylogenetics with the arborists part 1
10 History of file formats
09 Nobel prize or contamination
08 Looking back at 2019
07 Wham, BAM, thank you SAM.
06 Writing good bioinformatics software with Torsten Seemann
05 History of Genotyping - Decentralised Future
04 History of Genotyping - The early years
03 FASTQ - all your bases are belong to us
02 What bioinformatics software not to write part 2
01 What bioinformatics software not to write part 1
00 Trailer